Get genome information

Get genome information

getBioMartGenomeInfo(dataset)

Arguments

dataset

A BioMart dataset or a taxon ID. For a proper value, please see supportedOrganisms.

Value

A list.

Examples

getBioMartGenomeInfo(9606)
#> $dataset
#> [1] "hsapiens_gene_ensembl"
#> 
#> $version
#> [1] "GRCh38.p13"
#> 
#> $name
#> [1] "Homo sapiens (Human)"
#> 
#> $taxon_id
#> [1] "9606"
#> 
#> $genbank_accession
#> [1] "GCA_000001405.28"
#> 
#> $mart
#> [1] "genes_mart"
#> 
#> $seqname_style
#> $seqname_style$`Sequence-Name`
#> [1] "1" "2" "3" "4" "5"
#> 
#> $seqname_style$`GenBank-Accn`
#> [1] "CM000663.2" "CM000664.2" "CM000665.2" "CM000666.2" "CM000667.2"
#> 
#> $seqname_style$`RefSeq-Accn`
#> [1] "NC_000001.11" "NC_000002.12" "NC_000003.12" "NC_000004.12" "NC_000005.10"
#> 
#>