Description
Basic
| ORCiD | https://orcid.org/0000-0002-7395-8709 |
| Google Scholar | https://scholar.google.de/citations?user=zheH1qkAAAAJ |
| GitHub | https://github.com/jokergoo/ |
Experience
| German Cancer Research Center, German National Center of Tumor Diseases | Permanent scientist | 2022-2025 |
| German Cancer Research Center, German National Center of Tumor Diseases | Senior scientist | 2018-2021 |
| German Cancer Research Center | Post-dostoral researcher | 2013-2018 |
Study
| Nanjing University | Biochemistry and Molecular Biology | Ph.D. | 2009-2012 |
| Nanjing University | Biochemistry and Molecular Biology | Master | 2005-2008 |
| Nanjing University | Biochemistry and Molecular Biology | Bachelor | 2001-2005 |
Open-source Books
- Circular Visualization in R.
- ComplexHeatmap Complete Reference.
- Gene Set Enrichment Analysis with R and Bioconductor (ongoing).
Invited Talks
- Several examples of making complex heatmaps, EMBL Heidelberg, Germany, 2025.
- Analyze the R package ecosystem, Queen Mary University of London Charterhouse Square Bioinformatics network, UK, 2025.
- Biological data visualization in R and Bioconductor, GHGA Webinar, Heidelberg, Germany, 2024.
- Omics data analysis and software development for visualization tools, iMeta series, 2024.
- Complex heatmaps, China Gut Conference, 2023.
- Make Complex Heatmaps. Moffitt Cancer Center Bio-Data Club, USA, 2022.
Conference Talks
- On the Dependency Heaviness of CRAN/Bioconductor Ecosystem, Bioconductor conference 2023.
- rGREAT: an R/Bioconductor Package for Functional Enrichment on Genomic Regions, Bioconductor conference 2023.
- simplifyEnrichment: A Bioconductor Package for Clustering and Visualizing Functional Enrichment Results, EuroBioc conference 2022.
- cola: a general framework for consensus partitioning, Bioconductor conference 2022.
- On the heaviness of package dependencies, useR! conference 2022.
- spiralize: an R package for visualizing data on spirals, BioC Asia conference 2021.
- Make interactive complex heatmaps, Bioconductor conference 2021. Awarded as Best Innovative poster ideas.
- circlize: circular visualization in R, useR! conference 2015.
Teaching
- Develop the official Bioconductor teaching material.
- Workshop on gene set enrichment analysis, German Cancer Research Center, Germany, June 2025.
- Supervized two bachelor students (2015, 2017) and two master students (2018, 2023), Heidelberg University, Germany.
- Lectures for master students, Heidelberg University, Germany, 2018.
- Teaching assistant, Heidelberg University, Germany, 2014.
Grant
- Dependency Heaviness Analysis on Software Ecosystems, Klaus Tschira Stiftung, Germany, 10.2024 - 09.2026.