downstream_dependency.RdGet downstream dependency for a package
downstream_dependency(package, online = FALSE)Package name.
Whether use the newest package database directly from CRAN/Bioconductor or the pre-computated package database? The version of the pre-computated package database can be set via pkgndep_opt$heaviness_db_version.
Downstream packages with relations of Depends, Imports and LinkingTo are retrieved.
A data frame with all downstream packages.
# \dontrun{
downstream_dependency("ComplexHeatmap")
#> parents children dep_fields heaviness
#> 18 ComplexHeatmap AMARETTO Depends 5
#> 31 ComplexHeatmap EnrichedHeatmap Depends 11
#> 37 ComplexHeatmap InteractiveComplexHeatmap Depends 12
#> 10 ComplexHeatmap countToFPKM Depends 19
#> 70 ComplexHeatmap recoup Depends 7
#> 19 ComplexHeatmap ASURAT Imports 13
#> 20 ComplexHeatmap BioNERO Imports 7
#> 21 ComplexHeatmap BiocOncoTK Imports 10
#> 22 ComplexHeatmap BloodGen3Module Imports 9
#> 23 ComplexHeatmap CATALYST Imports 7
#> 24 ComplexHeatmap COCOA Imports 11
#> 25 ComplexHeatmap COTAN Imports 16
#> 26 ComplexHeatmap CeTF Imports 8
#> 27 ComplexHeatmap DEComplexDisease Imports 11
#> 28 ComplexHeatmap DEGreport Imports 7
#> 29 ComplexHeatmap DEP Imports 4
#> 30 ComplexHeatmap ELMER Imports 3
#> 32 ComplexHeatmap FLAMES Imports 6
#> 33 ComplexHeatmap GRaNIE Imports 8
#> 34 ComplexHeatmap GeneTonic Imports 8
#> 35 ComplexHeatmap GenomicSuperSignature Imports 13
#> 1 ComplexHeatmap IntLIM Imports 14
#> 36 ComplexHeatmap InterCellar Imports 9
#> 38 ComplexHeatmap LineagePulse Imports 10
#> 2 ComplexHeatmap MKomics Imports 18
#> 39 ComplexHeatmap MOMA Imports 9
#> 40 ComplexHeatmap MWASTools Imports 12
#> 41 ComplexHeatmap MatrixQCvis Imports 12
#> 42 ComplexHeatmap MesKit Imports 10
#> 3 ComplexHeatmap MitoHEAR Imports 10
#> 4 ComplexHeatmap PALMO Imports 7
#> 43 ComplexHeatmap POMA Imports 7
#> 44 ComplexHeatmap PathoStat Imports 7
#> 45 ComplexHeatmap PeacoQC Imports 12
#> 46 ComplexHeatmap RLSeq Imports 5
#> 5 ComplexHeatmap RNAseqQC Imports 7
#> 6 ComplexHeatmap RVA Imports 8
#> 47 ComplexHeatmap SPIAT Imports 10
#> 48 ComplexHeatmap SPONGE Imports 9
#> 49 ComplexHeatmap TBSignatureProfiler Imports 11
#> 50 ComplexHeatmap Xeva Imports 8
#> 51 ComplexHeatmap YAPSA Imports 2
#> 52 ComplexHeatmap airpart Imports 7
#> 7 ComplexHeatmap armada Imports 12
#> 53 ComplexHeatmap blacksheepr Imports 8
#> 8 ComplexHeatmap bulkAnalyseR Imports 5
#> 54 ComplexHeatmap celda Imports 4
#> 55 ComplexHeatmap cola Imports 4
#> 9 ComplexHeatmap conos Imports 19
#> 56 ComplexHeatmap cytoKernel Imports 12
#> 57 ComplexHeatmap diffUTR Imports 10
#> 58 ComplexHeatmap diffcyt Imports 8
#> 59 ComplexHeatmap fCCAC Imports 10
#> 60 ComplexHeatmap gCrisprTools Imports 14
#> 61 ComplexHeatmap gmoviz Imports 8
#> 62 ComplexHeatmap hermes Imports 8
#> 63 ComplexHeatmap iSEE Imports 11
#> 64 ComplexHeatmap microbiomeMarker Imports 6
#> 11 ComplexHeatmap missoNet Imports 15
#> 65 ComplexHeatmap monaLisa Imports 5
#> 66 ComplexHeatmap muscat Imports 8
#> 67 ComplexHeatmap musicatk Imports 6
#> 68 ComplexHeatmap pipeComp Imports 6
#> 12 ComplexHeatmap pkgndep Imports 21
#> 69 ComplexHeatmap profileplyr Imports 0
#> 13 ComplexHeatmap rKOMICS Imports 14
#> 14 ComplexHeatmap scITD Imports 4
#> 71 ComplexHeatmap sechm Imports 9
#> 72 ComplexHeatmap segmenter Imports 10
#> 73 ComplexHeatmap signifinder Imports 9
#> 74 ComplexHeatmap simplifyEnrichment Imports 7
#> 75 ComplexHeatmap singleCellTK Imports 0
#> 76 ComplexHeatmap sparrow Imports 8
#> 15 ComplexHeatmap tidyHeatmap Imports 17
#> 16 ComplexHeatmap visxhclust Imports 15
#> 17 ComplexHeatmap wilson Imports 4
#> 110 EnrichedHeatmap extraChIPs Imports 10
#> 210 EnrichedHeatmap profileplyr Imports 2
#> 111 BioNERO cageminer Imports 42
#> 112 DEGreport isomiRs Imports 24
#> 113 ELMER TCGAbiolinksGUI Imports 71
#> 114 MWASTools MetaboSignal Imports 41
#> 115 SPONGE miRspongeR Imports 132
#> 116 celda singleCellTK Imports 10
#> 211 diffcyt censcyt Depends 53
#> 117 diffcyt CyTOFpower Imports 30
#> 310 diffcyt treekoR Imports 55
#> 118 iSEE iSEEhex Depends 33
#> 311 iSEE iSEEu Depends 0
#> 212 iSEE iSEEhub Imports 37
#> 119 sechm SEtools Depends 19
#> 120 miRspongeR miRSM Imports 149
#> 121 iSEEhex iSEEu Depends 2
# }