OBO Foundry is a database of public biological ontologies. In this document, we import all ontologies on OBO Foundry and generate circular visualization, similarity heatmap and runtime performance on them.
id: ID of the ontology.title: Title of the ontology.n_terms: Number of terms.n_relations: Number of relations.is_tree: Whether the DAG is a tree. The DAG is a tree if n_terms == n_relations + 1.pa_avg: Average number of parent terms.ch_avg: Average number of child terms.asp1: width/height, where width is the largest number of terms on a specific distance to root (i.e. max(table(largest_dist_to_root(dag)))). height is the 99% percentile of heights of all terms.asp2: width/height, where width is the largest number of terms on a specific distance to root (i.e. max(table(shortest_dist_to_root(dag)))). height is the 99% percentile of heights of all terms.d_max: Maximal depth of terms.