simplifyEnrichment.Rd
Simplify functional enrichment results
simplifyEnrichment(mat, method = "binary_cut", control = list(),
plot = TRUE, term = NULL, verbose = TRUE,
column_title = qq("@{nrow(mat)} terms clustered by '@{method}'"),
ht_list = NULL, ...)
A similarity matrix.
Method for clustering the matrix. See cluster_terms
.
A list of parameters for controlling the clustering method, passed to cluster_terms
.
Whether to make the heatmap.
The full name or the description of the corresponding terms.
Column title for the heatmap.
Whether to print messages.
A list of additional heatmaps added to the left of the similarity heatmap.
Arguments passed to ht_clusters
.
The usage is the same as simplifyGO
, except you need to manually provide the term names by term
argument
if you want to draw the word clouds.
# There is no example
NULL
#> NULL