Add text to Hilbert curve — hc_polygon-GenomicHilbertCurve-method • HilbertCurve

Add text to Hilbert curve

# S4 method for GenomicHilbertCurve
hc_polygon(object, gr, gp = gpar(),
    end_type = c("average", "expanding", "shrinking"))

Arguments

object: a GenomicHilbertCurve-class object
gr: a GRanges object which contains the genomic regions to be mapped to the curve
gp: pass to hc_polygon,HilbertCurve-method
end_type: pass to hc_polygon,HilbertCurve-method

Details

It is basically a wrapper of hc_polygon,HilbertCurve-method.

Value

Refer to hc_polygon,HilbertCurve-method

Author

Zuguang Gu <z.gu@dkfz.de>

Examples

require(circlize)
require(GenomicRanges)
bed = generateRandomBed(nr = 20)
gr = GRanges(seqnames = bed[[1]], ranges = IRanges(bed[[2]], bed[[3]]))
hc = GenomicHilbertCurve()
hc_polygon(hc, gr)