All functions

GenomicHilbertCurve-class

The GenomicHilbertCurve class

GenomicHilbertCurve()

Initialize a Hilbert curve specifically for genomic data

HilbertCurve-class

The HilbertCurve class

HilbertCurve()

Initialize a Hilbert curve

default_overlay()

Default color overlay for adding new layers

hc_centered_text(<HilbertCurve>)

Add text to the center of the block

hc_layer(<GenomicHilbertCurve>)

Add a new layer to the Hilbert curve

hc_layer(<HilbertCurve>)

Add a new layer to the Hilbert curve

hc_layer

Method dispatch page for hc_layer

hc_level(<HilbertCurve>)

Level of the Hilbert curve

hc_map(<GenomicHilbertCurve>)

Draw a map which represents positions of different chromosomes on the curve

hc_normal_points(<HilbertCurve>)

Add points to the Hilbert curve

hc_offset(<HilbertCurve>)

Adjust positions

hc_png(<HilbertCurve>)

Save Hilbert curve as a PNG figure

hc_points(<GenomicHilbertCurve>)

Add points to the Hilbert curve

hc_points(<HilbertCurve>)

Add points to the Hilbert curve

hc_points

Method dispatch page for hc_points

hc_polygon(<GenomicHilbertCurve>)

Add text to Hilbert curve

hc_polygon(<HilbertCurve>)

Add polygons to Hilbert curve

hc_polygon

Method dispatch page for hc_polygon

hc_rect(<GenomicHilbertCurve>)

Add rectangles on Hilbert curve

hc_rect(<HilbertCurve>)

Add rectangles on Hilbert curve

hc_rect

Method dispatch page for hc_rect

hc_segmented_points(<HilbertCurve>)

Add points to the Hilbert curve

hc_segments(<GenomicHilbertCurve>)

Add line segments to Hilbert curve

hc_segments(<HilbertCurve>)

Add line segments to Hilbert curve

hc_segments

Method dispatch page for hc_segments

hc_text(<GenomicHilbertCurve>)

Add text to Hilbert curve

hc_text(<HilbertCurve>)

Add text to Hilbert curve

hc_text

Method dispatch page for hc_text

hc_which(<GenomicHilbertCurve>)

Query regions

hc_which(<HilbertCurve>)

Query regions

hc_which

Method dispatch page for hc_which

is_white()

Whether the color is white

show(<HilbertCurve>)

Print the HilbertCurve object

unzoom(<HilbertCurve>)

Transform zoomed positions to their original values

zoom(<HilbertCurve>)

Zoom original positions