Add line segments to Hilbert curve — hc_segments-GenomicHilbertCurve-method • HilbertCurve

Add line segments to Hilbert curve

# S4 method for GenomicHilbertCurve
hc_segments(object, gr, gp = gpar(lty = 1, lwd = 1, col = 1))

Arguments

object: a GenomicHilbertCurve-class object
gr: a GRanges object which contains the genomic regions to be mapped to the curve
gp: pass to hc_segments,HilbertCurve-method

Details

It is basically a wrapper of hc_segments,HilbertCurve-method.

Value

Refer to hc_segments,HilbertCurve-method

Author

Zuguang Gu <z.gu@dkfz.de>

Examples

require(circlize)
require(GenomicRanges)
bed = generateRandomBed(nr = 100)
gr = GRanges(seqnames = bed[[1]], ranges = IRanges(bed[[2]], bed[[3]]))
hc = GenomicHilbertCurve()
hc_segments(hc, gr, gp = gpar(col = rand_color(length(gr))))