difference_score.Rd
Difference score
difference_score(mat, cl)
The similarity matrix.
Cluster labels.
This function measures the different between the similarity values for the terms that belong to the same clusters and in different clusters. The difference score is the Kolmogorov-Smirnov statistic between the two distributions.
A numeric scalar.
mat = readRDS(system.file("extdata", "random_GO_BP_sim_mat.rds",
package = "simplifyEnrichment"))
cl = binary_cut(mat)
difference_score(mat, cl)
#> [1] 0.8330003