simplifyEnrichment_supplementary

• Supplementary file S01. Definition of gene overlap coefficients.
• Supplementary file S02. Semantic similarity matrices of random GO terms.
• Supplementary file S03. Examples of simplifyEnrichment.
• Supplementary file S04. Examples of five semantic similarity measurements.
• Supplementary file S05. Lower bounds of score s.
• Supplementary file S06. Interactively visualize the clustering results.
• Supplementary file S07. Global GO term similarity.
• Supplementary file S08. Test partitioning methods.
• Supplementary file S09. Compare similarity measurements - random_BP.
• Supplementary file S10. Compare similarity measurements - EBI Expression Atlas datasets.
• Supplementary file S11. Compare methods that summarize GO terms in clusters.
• Supplementary file S12. Select cutoff in binary cut clustering.
• Supplementary file S13. Concordance score between two clusterings.