Software

R

Downloads are from CRAN/Bioconductor/anaconda, updated on 2022-11-22.

Total downloads: 4.2M.

Visualization

Data analysis

Other tools

  • pkgndep: Check the Heaviness of Package Dependencies. CRAN GitHub stars
  • bsub: Submitter and monitor of LSF cluster. CRAN GitHub stars
  • GetoptLong: wrapper of the Perl module Getopt::Long, also provides a simple variable interpolation in R. CRAN GitHub stars
  • GlobalOptions: setting global options in R. CRAN GitHub stars

Perl

Books

Package status

Package GitHub Actions CRAN check bioc-devel bioc-release GitHub issues (opened) GitHub issues (closed)
circlize R-CMD-check - - GitHub issues GitHub issues
spiralize R-CMD-check - - GitHub issues GitHub issues
GetoptLong R-CMD-check - - GitHub issues GitHub issues
GlobalOptions R-CMD-check - - GitHub issues GitHub issues
bsub R-CMD-check - - GitHub issues GitHub issues
pkgndep R-CMD-check - - GitHub issues GitHub issues
simplifyEnrichment R-CMD-check - GitHub issues GitHub issues
ComplexHeatmap R-CMD-check GitHub issues GitHub issues
InteractiveComplexHeatmap R-CMD-check - GitHub issues GitHub issues
EnrichedHeatmap R-CMD-check - GitHub issues GitHub issues
HilbertCurve R-CMD-check - GitHub issues GitHub issues
gtrellis R-CMD-check - GitHub issues GitHub issues
rGREAT R-CMD-check - GitHub issues GitHub issues
cola R-CMD-check - GitHub issues GitHub issues
GeneSummary R-CMD-check - - - GitHub issues GitHub issues
UniProtKeywords R-CMD-check - - - GitHub issues GitHub issues
BioMartGOGeneSets R-CMD-check - - - GitHub issues GitHub issues