Sim_Kappa

Sim_Kappa

Sim_Kappa(dag, terms, anno_universe = NULL, verbose = simona_opt$verbose)

Methods

Sim_Kappa

Denote two sets A and B as the items annotated to term a and b. The similarity value is the kappa coeffcient of the two sets.

The universe or the background can be set via parameter anno_universe:

term_sim(dag, terms, method = "Sim_kappa",
    control = list(anno_universe = ...))